CDS

Accession Number TCMCG007C49034
gbkey CDS
Protein Id XP_009109223.2
Location complement(join(15484998..15485054,15485152..15485527,15485614..15485832,15485908..15485975,15486056..15486193,15486274..15486431,15486525..15486630,15486732..15486828,15487038..15487159,15487268..15487354,15487610..15487687,15487834..15488070))
Gene LOC103834881
GeneID 103834881
Organism Brassica rapa

Protein

Length 580aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009110975.3
Definition E3 ubiquitin protein ligase RIN2 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin- protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10636        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04141        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
GOs GO:0000209        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010363        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0010942        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0034052        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043068        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGATAAGGTACTTGTCGGTCTCGGTGGCATCAACAGCTCTGAGCTTTGTGGGGCTTCAAGTCTGGACAGAGTTGTCTTTGGATAGGCTTAGAGCTGATGGGCTGATTGCAAAGAACATTTCTTTAGGAGACTCCGAGCATGCGCTTGAGCTGCTTCTGGGATCTTACTTTACAATCGCCCTGTTGACCAATTTTGTGCTCAATGTGTATATTCTTCTTATACTCTCCCTCAAGACTCTATTTTTTGGAGATTTATATGGCGTTGAAACTAAAAAGTTGGTGGAGCGACTTGCCAATTACATCATTTACAAGGGTACATTTCTGCCGCTGGTGATTCCCCCAACAATATTTCAGGGTGTACTGTGGACAGTTTGGCTGACTGTTCTATGCACTTTAAAGATGTTTCAAGCTTTGGCTAGAGACCGGCTTGAACGATTGAATGCATCTCCTTCCTCTACACCTTGGACATACTTTCGTGTGTATTCAGTTCTCTTCTTGGTTCTCTCTGTTGATATGTTGTGGATAAAGCTTTCCCTTATGACATACAATACAATTGGTTCTTCTGTGTATCTGTTGTTACTTTTTGAGCCATGCAGTATTGCTTTTGAGACCTTGCAGGCGCTGTTAATTCATGGGTTTCAGTTACTTGATATGTGGATCAATCACTTAGTAGTCAATAACTCGGACTGCCAAAGATCCAAGTTTCTTGATTCCGTGACAGCAGGCTCACTGTTGGAATGGAAGGGCCTCCTCAACCGAAACCTTGGTTTCTTCCTGGACATGGCTACTTTGGTAATGGCACTATGTCATTATTTGCATATCTGGTGGCTCCATGGCATTGCCTTTCATCTGGTGGATGCAGTTTTGTTTCTCAACATACGTGCATTGCTCAGTGCAATTTTGAAACGAATGAAAGGATACATTAAACTGAGAATAGCTCTGGGTTCTCTCCATGCAGCGCTTCCTGATGCAACTTCTGAAGAGTTACGTGCATATGATGATGAATGTGCTATATGCCGGGAACCTATGGCTAAGGCTAAAAGGCTTCACTGCAACCACCTTTTCCATCTTGGATGCCTGCGATCCTGGTTGGATCAAGGTCTAAATGATGTTTATTCTTGTCCTACATGTCGTAAGCCTCTTTTTGCTGGTAGAACTGAAAGTGAGGCTAACCCTCGCACGGTTGAAGTCTCAAGGGATGAGCAGCTAGCGCGTCAGCTTGAAAGACAAAACAGTCCTGCTCATCCACTAGCCACTGGTTTATTCCCTGCTGAGATGCCAAGTTCTGTTGAAACTGATCCTTCGAGGAATTTAGGATTGGATCCAAGCTGGCTGCAGACATGGTCAGACCAGGGCATTGATGTGGCTGGTCCCTCTACTACCGCTTCTAGGTCCGTTGGACTGGGGAGGGTTCAGATGATGATGAGGCATCTTGCATCTGTTGGGGAAAGTTATGCTCAAACTGCACTTGACGATGCTGCTTGGAGTCTTTGGCCGATGAACCCTTCACAAGCTTCCACTTCTACTACAACAACCATACCTCCAGGTGCTGGTGGAAGGACAGGTGGTCTGCATCTAAGAACTGTATCAAACGTGACAAATGAAAGCTTGGCAAGTATACTAGCTATGGCCGAGACAGTGAGGGAAGTCATGCCACATGTGCCTGATGAAATTATTTTCCAGGACCTGCAGAGAACAAACTCTGTTGCTGTTACAGTAAACAATCTTCTCCAGATGTGA
Protein:  
MGIRYLSVSVASTALSFVGLQVWTELSLDRLRADGLIAKNISLGDSEHALELLLGSYFTIALLTNFVLNVYILLILSLKTLFFGDLYGVETKKLVERLANYIIYKGTFLPLVIPPTIFQGVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTYFRVYSVLFLVLSVDMLWIKLSLMTYNTIGSSVYLLLLFEPCSIAFETLQALLIHGFQLLDMWINHLVVNNSDCQRSKFLDSVTAGSLLEWKGLLNRNLGFFLDMATLVMALCHYLHIWWLHGIAFHLVDAVLFLNIRALLSAILKRMKGYIKLRIALGSLHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNDVYSCPTCRKPLFAGRTESEANPRTVEVSRDEQLARQLERQNSPAHPLATGLFPAEMPSSVETDPSRNLGLDPSWLQTWSDQGIDVAGPSTTASRSVGLGRVQMMMRHLASVGESYAQTALDDAAWSLWPMNPSQASTSTTTTIPPGAGGRTGGLHLRTVSNVTNESLASILAMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNLLQM